BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039D11LP1|AL430702
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig919 1779 0.0
>3x_Contig919
Length = 4576
Score = 1779 bits (896), Expect = 0.0
Identities = 901/904 (99%)
Strand = Plus / Minus
Query: 1 agcacctattccggttcgagttcaagtgatgtagacatcattgtgaacgcaccttctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 agcacctattccggttcgagttcaagtgatgtagacatcattgtgaacgcaccttctcca 1938
Query: 61 aaggcaggtgatgcgaagtcatttacgcacactcgccgcaacgctcaccaccgtcaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 aaggcaggtgatgcgaagtcatttacgcacactcgccgcaacgctcaccaccgtcaaagg 1878
Query: 121 aataccaaccaaactcgtcaatataataatcatcaccatgctcaacagcaccaattccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 aataccaaccaaactcgtcaatataataatcatcaccatgctcaacagcaccaattccaa 1818
Query: 181 ccactttcgcatatyaacgcaccttaccaaacaccgcaaccgcaataccatccgtatcca 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 ccactttcgcatatcaacgcaccttaccaaacaccgcaaccgcaataccatccgtatcca 1758
Query: 241 cagacaccacaccgtttttcaaactctttcgttccagtagcgcaacatgaaggcgcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 cagacaccacaccgtttttcaaactctttcgttccagtagcgcaacatgaaggcgcaaat 1698
Query: 301 watggtaatccaaggaaaagctcaatgaaaccaattgcaggttcagatgttatgactagg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 aatggtaatccaaggaaaagctcaatgaaaccaattgcaggttcagatgttatgactagg 1638
Query: 361 tacttagaacagttgcatcataatactttcgtatacgctgctaatattttgggagctacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 tacttagaacagttgcatcataatactttcgtatacgctgctaatattttgggagctacc 1578
Query: 421 caggatccggtattctatgatgaagacaatgcataaggcttcctcgcatagcattaccgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1577 caggatccggtattctatgatgaagacaatgcataaggcttcctcgcatagcattaccgc 1518
Query: 481 tacacagtaacccgaatgagaaacagtatacgcctctactattcaatatatgtatacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 tacacagtaacccgaatgagaaacagtatacgcctctactattcaatatatgtatacaaa 1458
Query: 541 cgaacatacatacatacatacatacacacgtacatattaatgtacctttactgttcttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 cgaacatacatacatacatacatacacacgtacatattaatgtacctttactgttcttaa 1398
Query: 601 atggactggacggtactcacccatgtcattgtttctgtgttgagcagggataacacacat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 atggactggacggtactcacccatgtcattgtttctgtgttgagcagggataacacacat 1338
Query: 661 caggctggattacgaccaagaaaccgagtgagaactcgtctcatgatttatcccacaact 720
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1337 caggctggattacgaccaagaaaccgagtgagacctcgtctcatgatttatcccacaact 1278
Query: 721 gtatatttgggcccttcaaagcgtcatttgtctgtcttttgggtccagcttattcttaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 gtatatttgggcccttcaaagcgtcatttgtctgtcttttgggtccagcttattcttaaa 1218
Query: 781 ttcacgtaaacctcattcaggtattttcattacttctttgggtaatgatactaaacctga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 ttcacgtaaacctcattcaggtattttcattacttctttgggtaatgatactaaacctga 1158
Query: 841 gattttcgtcctttaaagaaaaaaagatctgtaaaaccgctatttagatacatcaatata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 gattttcgtcctttaaagaaaaaaagatctgtaaaaccgctatttagatacatcaatata 1098
Query: 901 tata 904
||||
Sbjct: 1097 tata 1094
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6792
Number of Sequences: 1807
Number of extensions: 6792
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)